
Description:
MicroRNAs(miRNAs)aresmallnoncodingRNAsthatcontrolgeneexpressionattheposttranscriptionallevelthroughselectivelybindingtocomplementarymessengerRNAsequences. Approximately30%ofmammaliangenesareregulatedbythesesmallRNAmolecules,which affectavarietyof BIOLOGicalfunctions,includingdevelopment,celldifferentiation,proliferation,apoptosis,andmaintenanceofstemnessandimprinting.NorthernblottinghasbeenthemostcommonlyusedmethodforanalyzingindividualmiRNAs,althoughrecentlyanumberofnewapproacheshavebeendeveloped, suchas therelatedreal-timePCRandinvaderassays. LowsensitivityandpoorthroughputarethemainissuesofNorthernblotanalysis. Toresolvethisproblem, Signosishasdevelopedthe miRNAplateassaykits.Thekitsarehighlysensitive,andthebiochemicalconversionofmiRNAmoleculesintoCDNAsisnotneeded.Theprocedureoftheassayisassimpleasincubationandwash.
Principle:
IntheproprietarymiRNAplateassay,onemiRNAmoleculeisflankedbyacaptureoligoandabiotinateddetectionoligothroughtwobridgesoligos.OneofthebridgeoligosispartiallyhybridizedwiththemiRNAmoleculeandthecaptureoligoandanotherwiththemiRNAandthedetectionoligo.Thehybridisimmobilizedontoplatethroughhybridizationwithanimmobilizedoligoanddetectedbyastreptavidin-HRPconjugateandchemiluminecscentsubstrate.ThishybridstructureissensitivetothesequenceofthemiRNAmolecule.OnenucleotidedifferencewillpreventtheformationofthehybridandthereforemiRNAisoformcanbedifferentiated,whichnormallyishardtotacklewithNorthernblot.Inaddition,thesensitivityoftheassayishigherthanmiRNANorthernblotassay.
Data:
miRNAplateassay.BothmiR-133andmiR-1arepreferentiallyexpressedincardiacandskeletalmusclesandplayessentialrolesindifferentiation,proliferationandapoptosisofcardiaccells.DysregulatedmiRNAexpressionhasbeencorrelatedtodiseasedheartsinhumanpatientsandtherefore,theyarewithgreatpotentialsasdiagnosticMarkersandtherapeutictargetsforcardiovasculardisease.(A)SchematicediagramofmiRNAplateassay.(B)ExpressionofmiR-133andmiR-1wasanalyzedwith5ugoftotalRNApreparedfromhumansckeletalmuscle,heart,andliverthroughNorthernblot(top)andmiRNAplatassay(bottom).(C)DetectionofmiR-133expressionwascomparedwithNorthernblot(top)andmiRNAplateassay(bottom).